Transcriptomics workshop

Welcome to the Biomedical Informatics Hub’s Transcriptomics workshop pages.

Use the navigation panel on the left to navigate this workshop.

1. Openstack (start here!)
2. Introduction
3. Experimental Details
4. Getting Started
5. Quality Control
6. Filtering
7. rRNA
8. Prepare Reference
9. Align Reads
10. Counting Reads
11. DESeq2 - setup
12. DESeq2 - loading
13. DESeq2 - variable genes
14. DESeq2 - PCA
15. DESeq2 - Differential Expression
16. Pathway Analysis
17. Network Analysis

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